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Journal Article

Yang AHJ, Hsieh K, Patterson AS, B Ferguson S, Eisenstein M, Plaxco KW, H Soh T. 2014. Accurate zygote-specific discrimination of single-nucleotide polymorphisms using microfluidic electrochemical DNA melting curves.. Angew Chem Int Ed Engl. 53(12):3163-7.

Sengupta S, Johnson BPatrick, Swanson SAllen, Stewart R, Bradfield CAlan, Thomson JAlexander. 2014. Aggregate culture of human embryonic stem cell-derived hepatocytes in suspension are an improved in vitro model for drug metabolism and toxicity testing.. Toxicol Sci. 140(1):236-45.

Jung YKyung, Woo M-A, H Soh T, Park HGyu. 2014. Aptamer-based cell imaging reagents capable of fluorescence switching.. Chem Commun (Camb). 50(82):12329-32.

Cho M, Oh SSoo, Nie J, Stewart R, Radeke MJ, Eisenstein M, Coffey PJ, Thomson JA, H Soh T. 2015. Array-based discovery of aptamer pairs.. Anal Chem. 87(1):821-8.

Lin TC, Seiler MJ, Zhu D, Falabella P, Hinton DR, Clegg DO, Humayun MS, Thomas BB. 2017. Assessment of Safety and Functional Efficacy of Stem Cell-Based Therapeutic Approaches Using Retinal Degenerative Animal Models. Stem Cells International. In Press

Leach LL, Buchholz DE, Nadar VP, Lowenstein SE, Clegg DO. 2015. Canonical/β-catenin Wnt pathway activation improves retinal pigmented epithelium derivation from human embryonic stem cells.. Invest Ophthalmol Vis Sci. 56(2):1002-13.

Forest DL, Johnson LV, Clegg DO. 2015. Cellular models and therapies for age-related macular degeneration.. Dis Model Mech. 8(5):421-7.

Hou Z, Meyer S, Propson NE, Nie J, Jiang P, Stewart R, Thomson JA. 2015. Characterization and target identification of a DNA aptamer that labels pluripotent stem cells.. Cell Res. 25(3):390-3.

Dixon JR, Jung I, Selvaraj S, Shen Y, Antosiewicz-Bourget JE, Lee AYoung, Ye Z, Kim A, Rajagopal N, Xie W et al.. 2015. Chromatin architecture reorganization during stem cell differentiation.. Nature. 518(7539):331-6.

Leach LL, Clegg DO. 2015. Concise Review: Making Stem Cells Retinal: Methods for Deriving Retinal Pigment Epithelium and Implications for Patients With Ocular Disease.. Stem Cells. 33(8):2363-73.

Shi X, Richard J, Zirbes KM, Gong W, Lin G, Kyba M, Thomson JA, Koyano-Nakagawa N, Garry DJ. 2014. Cooperative interaction of Etv2 and Gata2 regulates the development of endothelial and hematopoietic lineages.. Dev Biol. 389(2):208-18.

Hou Z, Jiang P, Swanson SA, Elwell AL, Nguyen BKim S, Bolin JM, Stewart R, Thomson JA. 2015. A cost-effective RNA sequencing protocol for large-scale gene expression studies.. Sci Rep. 5:9570.

Pennington BO, Clegg DO, Melkoumian ZK, Hikita ST. 2015. Defined culture of human embryonic stem cells and xeno-free derivation of retinal pigmented epithelial cells on a novel, synthetic substrate.. Stem Cells Transl Med. 4(2):165-77.

Yamniuk AP, Newitt JA, Doyle ML, Arisaka F, Giannetti AM, Hensley P, Myszka DG, Schwarz FP, Thomson JA, Eisenstein E. 2015. Development of a Model Protein Interaction Pair as a Benchmarking Tool for the Quantitative Analysis of 2-Site Protein-Protein Interactions.. J Biomol Tech. 26(4):125-41.

Chan SSun-Kin, Hagen HR, Swanson SA, Stewart R, Boll KA, Aho J, Thomson JA, Kyba M. 2016. Development of Bipotent Cardiac/Skeletal Myogenic Progenitors from MESP1+ Mesoderm.. Stem Cell Reports. 6(1):26-34.

Rowland TJ, Blaschke AJ, Buchholz DE, Hikita ST, Johnson LV, Clegg DO. 2013. Differentiation of human pluripotent stem cells to retinal pigmented epithelium in defined conditions using purified extracellular matrix proteins.. J Tissue Eng Regen Med. 7(8):642-53.

Croze RH, Clegg DO. 2014. Differentiation of pluripotent stem cells into retinal pigmented epithelium.. Dev Ophthalmol. 53:81-96.

Elcheva I, Brok-Volchanskaya V, Kumar A, Liu P, Lee J-H, Tong L, Vodyanik M, Swanson S, Stewart R, Kyba M et al.. 2014. Direct induction of haematoendothelial programs in human pluripotent stem cells by transcriptional regulators.. Nat Commun. 5:4372.

McAlpine JA, Lu H-T, Wu KC, Knowles SK, Thomson JA. 2014. Down-regulation of argininosuccinate synthetase is associated with cisplatin resistance in hepatocellular carcinoma cell lines: implications for PEGylated arginine deiminase combination therapy.. BMC Cancer. 14:621.

Leng N, Li Y, McIntosh BE, Nguyen BKim, Duffin B, Tian S, Thomson JA, Dewey CN, Stewart R, Kendziorski C. 2015. EBSeq-HMM: a Bayesian approach for identifying gene-expression changes in ordered RNA-seq experiments.. Bioinformatics. 31(16):2614-22.

Friend K, Brooks HA, Propson NE, Thomson JA, Kimble J. 2015. Embryonic Stem Cell Growth Factors Regulate eIF2α Phosphorylation.. PLoS One. 10(9):e0139076.

Lane A, Philip LRachel, Ruban L, Fynes K, Smart M, Carr A, Mason C, Coffey P. 2014. Engineering Efficient Retinal Pigment Epithelium Differentiation From Human Pluripotent Stem Cells.. Stem Cells Transl Med.

Thomson JA, Burkholder DA, Heithaus MR, Fourqurean JW, Fraser MW, Statton J, Kendrick GA. 2014. Extreme temperatures, foundation species, and abrupt ecosystem change: an example from an iconic seagrass ecosystem.. Glob Chang Biol.

Howden SE, Thomson JA. 2014. Gene targeting of human pluripotent stem cells by homologous recombination.. Methods Mol Biol. 1114:37-55.

Silva M, Daheron L, Hurley H, Bure K, Barker R, Carr AJ, Williams D, Kim H-W, French A, Coffey PJ et al.. 2015. Generating iPSCs: translating cell reprogramming science into scalable and robust biomanufacturing strategies.. Cell Stem Cell. 16(1):13-7.

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